DNA Damage Atlas


GSM4280502-WT_END-seq_with_MRN--CtIP-Mn




Basic Information

Manual

Sample ID:   

SRR10956546


Source Project ID:   

GSE138915

Cell Type:   

Testis


Organism:   

Mus musculus


Strain:   

C57BL/6


Genotype:   

WT


In-situ Treatment:   

Exo VII + Exo T + MRN + CtIP


Harvested Time:   

age: juvenile


Spike-in Intensity:   

no spike in


Spike-in percentage:   

2%


Layout:   

SINGLE


Instrument model:   

Illumina NextSeq 550


Technique:   

END-seq


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Telomere Analysis

Manual

Ratio of (G-rich strand/C-rich strand): 0.006785



Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrUn_GL4563966343178001202178.0434-
chrUn_GL4563894779156881067874.1401-
chr514666082214667047914666670131.9293-
chr1293571176935809229357714617.366-
chr1630823640308335973082960713.2497-
chr871427464714367677143316513.1037-
chr1297055663970675219706144312.3378+
chrX14347783214348880714348303211.737+
chr51476056861476153881476115418.78831-
chr31289309511289407751289367897.05101-
Download the Full Peak List




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