DNA Damage Atlas


GSM4304658-WT_30min_rep2




Basic Information

Manual

Sample ID:   

SRR11053435


Source Project ID:   

GSE134225

Organism:   

Saccharomyces cerevisiae


Strain:   

DF5, wildtype


Treatment:   

MMS


Treatment Time:   

MMS: 0.02%


Harvested Time:   

harvested at 30 min


Layout:   

SINGLE


Instrument model:   

NextSeq 500


Technique:   

GLOE-seq


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrM13811193811435511556.5+
chrM79096801707925110119.5-
chrM2057421628212429887.46+
chrM4128642571414259020.33+
chrM6030362203613859009.99+
chrM2840129482287708629.64-
chrM3644837272365867405.22-
chrM7358275990739987246.83-
chrM2454525584246237224.36-
chrM2606026782262367181.15-
Download the Full Peak List



Overlapped Peaks from Replicates




Average Peak Intensity Top 10 Merged Peaks
Chromosome Start End Summit Intensity Strand
chrM13811193801435510460.1+
chrM7909880161792519684.42-
chrM2057421622212428707.79+
chrM6033262197613858222.32+
chrM2841429440287708175.22-
chrM4129442397414258072.4+
chrM3644837264365866663-
chrM7358575765739986579.48-
chrM2606026782262366547.95-
chrM5941760181596076255.28-
Download the Full Merged Peak List



Motif Analysis

Manual





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