DNA Damage Atlas

GSM4322063_Enterocyte_High_M1

Basic Information Genome Browser Telomere Analysis Distribution Quantification Visualization Motif Analysis


Basic Information

Manual

Sample ID:   

SRR11119506


Source Project ID:   

GSE145598

Cell Type:   

Enterocyte


Organism:   

Mus musculus


Layout:   

SINGLE


Instrument model:   

illumina NextSeq 500


Technique:   

sBLISS


Others:   

cell markers: Cd73/Nt5e high


Fastqc:  



Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)



Telomere Analysis

Manual

Ratio of (G-rich strand/C-rich strand): 0


Distribution

Manual




Genomic distribution Repeat distribution Top 10 simple repeats


Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrX1434828701434832481434830751139.2-
chrUn_GL45638999481095310680992.712-
chrUn_GL456396118081282011950967.302+
chr7104427785104428240104428095481.568-
chr10722970347229748372297293433.781-
chrY645339046453425464534040240.561+
chr2707818187078218070781956239.592+
chr3134503097134503312134503101235.91+
chr3440230084402337344023147229.285+
chr17908297979083029990830167223.292-
Download the Full Peak List


Visualization

Manual



Motif Analysis

Manual





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