DNA Damage Atlas


GSM4386824-Colo320OxR1




Basic Information

Manual

Sample ID:   

SRR11247064


Source Project ID:   

GSE146473

Cell Type:   

Colo320hsr


Organism:   

Homo sapiens


Treatment:   

Oxaliplatin


Treatment Time:   

2hrs


Treatment Dose:   

200uM


Layout:   

SINGLE


Instrument model:   

Illumina HiSeq 4000


Technique:   

XR-seq


Others:   

antibody: anti-XPG antibody


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrM97151460413021950.435/
chrM527755415332890.977/
chrM481351944855851.654/
chrM11062521809.676/
chrM196639623622747.339/
chrM618067336457658.547/
chrM134019341713358.145/
chr325509000255090412550901974.8889/
chr1328536721285374372853681263.2529/
chr1328540328285436932854104662.6668/
Download the Full Peak List



Motif Analysis

Manual





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