DNA Damage Atlas

GSM4498739-U2OS_M_phase_minus_Aphidicolin

Basic Information Genome Browser Distribution Quantification Visualization Motif Analysis


Basic Information

Manual

Sample ID:   

SRR11612553


Source Project ID:   

GSE149373

Cell Type:   

U2OS


Organism:   

Homo sapiens


Cell Phase:   

M


Layout:   

PAIRED


Instrument model:   

HiSeq X Ten


Technique:   

MiDAS


Fastqc:  



Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)



Distribution

Manual




Genomic distribution Repeat distribution Top 10 simple repeats


Quantification

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Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrM200163998299317.45/
chr5168443000168443199168443099191.517/
chr14289100002891019928910099136.798/
chr2795780079579997957899136.798/
chr3130358600130358799130358699136.798/
chr3182932400182932599182932499136.798/
chr4264010002640119926401099136.798/
chr7929972009299739992997299136.798/
chr8530138005301399953013899136.798/
chr12158318001583199915831899109.438/
Download the Full Peak List


Visualization

Manual



Motif Analysis

Manual





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