DNA Damage Atlas

GSM4498746-HBE_M_phase_plus_Aphidicolin

Basic Information Genome Browser Distribution Quantification Visualization Motif Analysis


Basic Information

Manual

Sample ID:   

SRR11612560


Source Project ID:   

GSE149373

Cell Type:   

HBE


Organism:   

Homo sapiens


Treatment:   

Aphidicolin


Treatment Dose:   

0.3uM


Cell Phase:   

M


Layout:   

PAIRED


Instrument model:   

HiSeq X Ten


Technique:   

MiDAS


Fastqc:  



Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)



Distribution

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Genomic distribution Repeat distribution Top 10 simple repeats


Quantification

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Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrM0163998199923.193/
rDNA40200423994129935.2871/
rDNA31000325993179933.8473/
rDNA28200293992879926.1046/
chr1622499200224993992249929919.6604/
chr118710460018710479918710469916.3837/
chr1288092800880929998809289916.3837/
chr151361200513613995136129916.3837/
chr1655554600555547995555469916.3837/
chr212008940012008959912008949916.3837/
Download the Full Peak List


Visualization

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Motif Analysis

Manual





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