DNA Damage Atlas

GSM4546569-spo11-F260A2

Basic Information Genome Browser Distribution Quantification Visualization Motif Analysis


Basic Information

Manual

Sample ID:   

SRR11772334,SRR11772335


Source Project ID:   

GSE150313

Organism:   

Saccharomyces cerevisiae


Genotype:   

spo11-F260A, sae2Δ


Harvested Time:   

4 hr in meiosis


Layout:   

SINGLE


Instrument model:   

Illumina HiSeq 2500


Technique:   

S1-seq


Fastqc:  



Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)



Distribution

Manual




Genomic distribution Top 10 simple repeats


Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrIII091530812936.6+
chrM1877422545204076099.52+
chrIV0705975749.51+
chrXII1079911702111965669.73+
chrVIII5562965573875569224226.94-
chrVI4310530547143741.84+
chrXV0563182978.51+
chrXI053472508.92+
chrXIV6224725166221903.21+
chrXII1064472106568210650741748.03-
Download the Full Peak List


Visualization

Manual



Motif Analysis

Manual





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