DNA Damage Atlas


GSM4605888-CSR-HTGTS-Seq_WT_IL4_3




Basic Information

Manual

Sample ID:   

SRR11974586


Source Project ID:   

GSE152190

Cell Type:   

Splenic mature B cells


Organism:   

Mus musculus


Treatment:   

cytokine stimulation


Treatment Time:   

96hrs


Genotype:   

WT


Targeted break:   

target locus: WT


Layout:   

PAIRED


Instrument model:   

NextSeq 550


Technique:   

CSR-HTGTS


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr1211327332511327778211327624848422.6-
chr1211342587511343421211343091434405.4-
chr713059157213059178013059157330667.8+
chr790441820904420259044202029042.2-
chrX14551503314551523614551503426186+
chr1012176307512176328412176327825434.2-
chr513698260813698282613698282524384.2-
chr510407215910407236910407236323288.1-
chr1344155074415714441571320544-
chr212910946212910967212910946920250.5+
Download the Full Peak List



Motif Analysis

Manual





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