DNA Damage Atlas


GSM4630497-SK1_ecm11Δ_2




Basic Information

Manual

Sample ID:   

SRR12066923


Source Project ID:   

GSE152957

Cell Type:   

meiotic Saccharomyces cerevisiae culture


Organism:   

Saccharomyces cerevisiae SK1


Strain:   

SK1


Genotype:   

ecm11Δ


Harvested Time:   

5 hr in meiosis


Layout:   

PAIRED


Instrument model:   

Illumina HiSeq 2500


Technique:   

SPO11-oligo


Others:   

epitope tag: epitope tag: Spo11-Flag


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrXVI8122698136288129952837.41+
chrXII8708618721588715221893.73+
chrVI9488396654958851876.19-
chrIV8345378369208359371716.38-
chrX2804922814782808781685.57+
chrVII2491012502822496541673.14+
chrII6420266434466429031665.79+
chrIV1476332147763514767641628.46-
chrXVI3389973402843395321572.86-
chrII2162092177512172061570.89-
Download the Full Peak List



Overlapped Peaks from Replicates




Average Peak Intensity Top 10 Merged Peaks
Chromosome Start End Summit Intensity Strand
chrXVI8122698135878129952296.35+
chrVII2491292502822496542048.57+
chrXIV4266614280174270671673.24+
chrII2578482584232581821666.39+
chrX2804922814742808781651.74+
chrVI9488396654958851643.54-
chrXII8708848721588715221624.99+
chrII6421356434466429031599.74+
chrXIV3656393669643666411560.36+
chrIV1980212005001985831542.78+
Download the Full Merged Peak List



Motif Analysis

Manual





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