DNA Damage Atlas


GSM4630499-SK1_homeologous_5h




Basic Information

Manual

Sample ID:   

SRR12066926,SRR12066927


Source Project ID:   

GSE152957

Cell Type:   

meiotic Saccharomyces cerevisiae culture


Organism:   

Saccharomyces cerevisiae SK1


Strain:   

SK1


Genotype:   

homeologous strain


Harvested Time:   

5 hr in meiosis


Layout:   

PAIRED


Instrument model:   

Illumina HiSeq 2500


Technique:   

SPO11-oligo


Others:   

epitope tag: epitope tag: Spo11-Flag


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrVI9468496639959552360.32+
chrIV8350338368628358622218.18+
chrIV1980241991851985832023.22+
chrVIII5159965180435173731801.84+
chrXVI8122228136298129951791.14+
chrVII6088526109436101321783.83+
chrX7046857061277053111686.55+
chrVII8479668495738487521520.61-
chrVIII1215391231471221671460.04+
chrVIII1886971914671903451402.17+
Download the Full Peak List



Overlapped Peaks from Replicates




Average Peak Intensity Top 10 Merged Peaks
Chromosome Start End Summit Intensity Strand
chrXIII7977777987357982203915.95+
chrVII8482078494308487523718.21-
chrVI9498996588958183396.63+
chrXV9432599438519435673338.93-
chrVIII4222604231274228263337.01+
chrII2169972176892172063334.56-
chrXI4020014027054021913255.97-
chrIV8353788366658358643195.68-
chrXIV4267074277924274773163.18+
chrXIII6669396677276674252947.36+
Download the Full Merged Peak List



Motif Analysis

Manual





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