DNA Damage Atlas


GSM4680457-3xCUP1_Cu_TrAEL-seq




Basic Information

Manual

Sample ID:   

SRR12279044


Source Project ID:   

GSE154811

Organism:   

Saccharomyces cerevisiae


Strain:   

BY4742 3xCUP1


Treatment:   

SD + CuSO4


Treatment Time:   

6hrs


Treatment Dose:   

1mM


Layout:   

SINGLE


Instrument model:   

NextSeq 500


Technique:   

TrAEL-seq


Others:   

fix and post-processing: 70% ethanol


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
III036521583301.7-
XIV78402678446478420960808.6+
VIII56241556277856257041316.7+
XI66658166696366670538228.8+
VIII55682855713555691433873.1+
XII11049113581127333316.9-
VI45384822471129959.3-
XII10650181065304106515620913.6+
XIII92427092457492437820025.1+
I23007923036423018318794.6+
Download the Full Peak List




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