DNA Damage Atlas


GSM4847767-MEF_UVB




Basic Information

Manual

Sample ID:   

SRR12868816,SRR12868817


Source Project ID:   

GSE159807

Cell Type:   

MEF


Organism:   

Mus musculus


Treatment:   

UVB


Treatment Dose:   

1000 J/m2


Harvested Time:   

repair time: 0 hr


Layout:   

PAIRED


Instrument model:   

Illumina HiSeq 2500


Technique:   

Circle-damage-seq


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrM366266953.4412/
chrUn_JH5843046167768785660872.31598/
rDNA4162243922429302.19347/
chrUn_JH5843045829361628601632.09592/
rDNA3871541015392601.70292/
rDNA0457126621.66553/
chrUn_JH5843043810341720384971.54928/
chr41464914041464965601464950401.22335/
chr113100862310281231021461.22057/
chr122022657420234567202333111.21261/
Download the Full Peak List



Motif Analysis

Manual





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