DNA Damage Atlas

GSM4880387-BLISS_MYC_AID_A1

Basic Information Genome Browser Distribution Quantification Visualization Motif Analysis


Basic Information

Manual

Sample ID:   

SRR12981465, SRR12981466, SRR12981467


Source Project ID:   

GSE160849

Cell Type:   

K562


Organism:   

Homo sapiens


Treatment:   

DMSO


Layout:   

SINGLE


Instrument model:   

Illumina NextSeq 500


Technique:   

BLISS


Fastqc:  



Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)



Distribution

Manual




Genomic distribution Repeat distribution Top 10 simple repeats


Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr9_gl000199_random137932138139138135617.493-
chr6442809844284394428234301.009+
rDNA365755064249259.411+
chrUn_gl000220109010110884109719253.195+
chrUn_gl000220152998155004153641234.925+
chrUn_gl000224171741908418187210.568+
chrM389662765403203.433-
chrUn_gl000224431664445623191.727+
chrUn_gl000220114668116314115196178.059+
chrUn_gl000220158618160290159168171.043+
Download the Full Peak List


Visualization

Manual



Motif Analysis

Manual





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