DNA Damage Atlas


GSM4880390-BLISS_MYC_AID_A6




Basic Information

Manual

Sample ID:   

SRR12981474, SRR12981475, SRR12981476


Source Project ID:   

GSE160849

Cell Type:   

K562


Organism:   

Homo sapiens


Treatment:   

indole-3 acetic acid (IAA) + Etoposide


Treatment Time:   

3.5hrs + 3hrs


Treatment Dose:   

25uM Etoposide


Layout:   

SINGLE


Instrument model:   

Illumina NextSeq 500


Technique:   

BLISS


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr6442802344284404428234230.972+
chrUn_gl000220153002155003153691225.118+
rDNA356256234299221.62+
chrUn_gl000220109034111229109719211.465+
chrUn_gl000224452666635550188.949+
chrUn_gl000224171751930018187178.685+
chrUn_gl000224105841277211878164.736+
chrM195055765377152.53-
chr9_gl000199_random137709138511138136143.651-
chr22230351852303569323035407113.758+
Download the Full Peak List



Motif Analysis

Manual





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