DNA Damage Atlas


GSM4886901-BM_PreB_Rep3




Basic Information

Manual

Sample ID:   

SRR12996684


Source Project ID:   

GSE151906

Cell Type:   

BM Pre B cell


Organism:   

Mus musculus


Strain:   

129sv


Treatment:   

STI-571


Genotype:   

WT


Layout:   

PAIRED


Instrument model:   

NextSeq 500


Technique:   

LAM-HTGTS


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr6691109016911111769110909110684+
chr6706078287060803970608033109084-
chr6697265696972678069726573105917+
chr670518632705188527051884895509-
chr668037110680373216803732193424.9-
chr668256650682568726825686888126.9-
chr670260406702606177026040687794.8+
chr667861451678616626786166273543.6-
chr668271051682712706827126669839.9-
chr668121613681218306812182668430.7-
Download the Full Peak List



Overlapped Peaks from Replicates




Average Peak Intensity Top 10 Merged Peaks
Chromosome Start End Summit Intensity Strand
chr6676102996761051167610509110080-
chr6691109016911111469110909109904+
chr6701718057017201870171808109813+
chr6702168557021706670216859106534+
chr6706078287060803970608033106060-
chr6699004216990063269900425100550+
chr669726569697267786972657399740.3+
chr670518642705188527051884899072.7-
chr668256661682568726825686895645.5-
chr668037110680373216803732190487.1-
Download the Full Merged Peak List



Motif Analysis

Manual





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