DNA Damage Atlas


GSM4952280-WT_A_cycling_Cas9_Rep2




Basic Information

Manual

Sample ID:   

SRR13177150


Source Project ID:   

GSE162453

Cell Type:   

v-Abl pro-B cell


Organism:   

Mus musculus


Treatment:   

nucleofection Cas9:c-Myc gRNA


Genotype:   

Emu-Bcl2


Cell Phase:   

cycling


Targeted break:   

c-Myc


Layout:   

PAIRED


Instrument model:   

Illumina MiSeq


Technique:   

LAM-HTGTS


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr15619840796199022061987304159735+
chr21611572491611574531611574491348.3-
chr5658551906585539165855390912.281-
chr10681685746816877668168574907.765+
chr17297489112974911329749111907.765-
chr19330044433006463300444907.765+
chr3951653879516558995165587907.765-
chr9443470874434729144347287898.865-
chr15663162086631644066316208790.381+
Download the Full Peak List



Motif Analysis

Manual





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