DNA Damage Atlas


GSM4952292-Lig4Ku70K_C1_Cas9_Rep2




Basic Information

Manual

Sample ID:   

SRR13177162


Source Project ID:   

GSE162453

Cell Type:   

v-Abl pro-B cell


Organism:   

Mus musculus


Treatment:   

STI-571 + nucleofection Cas9:c-Myc gRNA


Treatment Time:   

STI-571: 96hrs


Treatment Dose:   

STI-571: 3µM


Genotype:   

Emu-Bcl2, Lig4-/- Ku70-/- +Ku70


Cell Phase:   

G1


Targeted break:   

c-Myc


Layout:   

PAIRED


Instrument model:   

Illumina MiSeq


Technique:   

LAM-HTGTS


Fastqc:  




Genome Browser

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  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr73750407637504277375042763141.85-
chr66943794369438145694381433126.3-
chr67011677970117354701169792745.71-
chr67072224570722865707224452546.42-
chr156198730461987706619873192.29512e+06+
Download the Full Peak List



Motif Analysis

Manual





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