DNA Damage Atlas


GSM4990618-RFe003_DPD190_WT_2




Basic Information

Manual

Sample ID:   

SRR13312154


Source Project ID:   

GSE163912

Cell Type:   

CD34+ HSPCs


Organism:   

Homo sapiens


Treatment:   

Resuspended in P3 buffer with complexed Cas9:HBB RNPs + electroporated using the Lonza 4D Nucleofector


Layout:   

PAIRED


Instrument model:   

Illumina MiSeq


Technique:   

LAM-HTGTS


Others:   

wild type Cas9 genome-wide repair


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr91045947421045970761045958836928.82+
chr96377024637729963770241420.45+
chr8197660031976624019766203988.924-
chr10798174397981764079817439777.363+
chr1221959132219611422195913777.363+
chr16289875372898773828987737777.363-
chr18343548034356813435480777.363+
chr4141090017141090219141090017773.515+
chr9104403530104403834104403607770.97+
chr12206444720646502064647769.704-
Download the Full Peak List



Motif Analysis

Manual





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