DNA Damage Atlas


GSM5005333-NotI_PmeI_SfiI_END-seq




Basic Information

Manual

Sample ID:   

SRR13358283


Source Project ID:   

GSE154811

Organism:   

Saccharomyces cerevisiae


Strain:   

BY4741


Treatment:   

YPD


In-situ Treatment:   

Exo VII + Exo T


Targeted break:   

NotI PmeI SfiI


Spike-in Intensity:   

no spike in


Layout:   

SINGLE


Instrument model:   

NextSeq 500


Technique:   

END-seq


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
XII457083457087/12324700/
XII466220466224/9665880/
XII153253153257/386105/
II574873574877/330762/
XI305721305725/321422/
IX344465344469/317100/
XV10524241052428/303173/
VIII255719255723/291440/
XII124611124615/290875/
XI258703258707/289911/
Download the Full Peak List




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