DNA Damage Atlas

GSM5086320-Proof-of-concept-raw-BspqPreCRbiotin_ACAGTG_all

Basic Information Genome Browser Quantification Visualization


Basic Information

Manual

Sample ID:   

SRR13645191


Source Project ID:   

GSE166843

Cell Type:   

U2OS


Organism:   

Homo sapiens


Targeted break:   

Nt.BspQI


Layout:   

SINGLE


Instrument model:   

Illumina HiSeq 2500


Technique:   

RADD-Seq


Fastqc:  



Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)



Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrM35583559/3661.2/
chr104699895846998959/2262.54/
chr172124621121246212/2221.4/
chr1234915061234915062/2097.99/
chr18598758385987584/2056.86/
chr172119615221196153/2015.72/
chr172125119721251198/2015.72/
chr172122480221224803/1974.58/
chr172124832321248324/1974.58/
chr822096402209641/1974.58/
Download the Full Peak List


Visualization

Manual





Copyright © 2023 All Rights Reserved by Wu lab