DNA Damage Atlas

GSM5086325-Sample_9_UsOS50_cont__hoGG1_control

Basic Information Genome Browser Distribution Quantification Visualization Motif Analysis


Basic Information

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Sample ID:   

SRR13576541


Source Project ID:   

GSE166843

Cell Type:   

U2OS


Organism:   

Homo sapiens


Treatment:   

hoGG1_control


Layout:   

SINGLE


Instrument model:   

Illumina HiSeq 2500


Technique:   

RADD-Seq


Fastqc:  



Genome Browser

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  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)



Distribution

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Genomic distribution Repeat distribution Top 10 simple repeats


Quantification

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Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrM04506335441.544/
chr9_gl000199_random56962574865716012.3848/
chr19_gl000208_random08341965.88346/
chr9_gl000199_random9877899150989635.53143/
chr9_gl000199_random1555071558731556895.04548/
chrUn_gl00022607591884.72697/
chr9_gl000199_random1102971106591104774.08099/
chr9_gl000199_random6831268873686793.95005/
chr9_gl000199_random3403435186344593.93878/
chrUn_gl0002255038251402509143.56915/
Download the Full Peak List


Visualization

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Motif Analysis

Manual





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