DNA Damage Atlas

GSM5086326-Sample_10_UsOS50_cont_control

Basic Information Genome Browser Distribution Quantification Visualization Motif Analysis


Basic Information

Manual

Sample ID:   

SRR13576540


Source Project ID:   

GSE166843

Cell Type:   

U2OS


Organism:   

Homo sapiens


Layout:   

SINGLE


Instrument model:   

Illumina HiSeq 2500


Technique:   

RADD-Seq


Fastqc:  



Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)



Distribution

Manual




Genomic distribution Repeat distribution Top 10 simple repeats


Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrM9708110281031859.2846/
chrM19843960313956.4239/
chrM08809750.1012/
chrM907106195742.2139/
chrM16651934174636.8866/
chr9_gl000199_random57112573375716127.1551/
chr9_gl000199_random98927989979896126.5345/
chr9_gl000199_random15565615572415568925.1584/
chrUn_gl00022550849509825090424.9909/
chr9_gl000199_random68637687246867924.1587/
Download the Full Peak List


Visualization

Manual



Motif Analysis

Manual





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