DNA Damage Atlas

GSM5100379-PAR_ChIP-seq_in_preB_wihout_AsisI_induction

Basic Information Genome Browser Quantification Visualization


Basic Information

Manual

Sample ID:   

SRR13764820


Source Project ID:   

GSE167253

Cell Type:   

Abel pre-B cell


Organism:   

Mus musculus


Treatment:   

Imatinib


Treatment Time:   

24hrs


Treatment Dose:   

3uM


Layout:   

SINGLE


Instrument model:   

NextSeq 550


Technique:   

ChIP-seq (anti-PAR)


Fastqc:  



Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)



Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr38654761186547614/888/
chr38853158888531591/888/
chr1157021139157021142/592/
chr1184732391184732394/592/
chr19267606092676063/592/
chr194333364943333652/592/
chr194523267245232675/592/
chr4149773719149773722/592/
chr6124903958124903961/592/
chr7131410089131410092/592/
Download the Full Peak List


Visualization

Manual





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