DNA Damage Atlas

GSM5100412-NT_SAR-seq_for_PARPi_in_iNeuron

Basic Information Genome Browser Distribution Quantification Visualization Motif Analysis


Basic Information

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Sample ID:   

SRR13764941


Source Project ID:   

GSE167257

Cell Type:   

iNeuron


Organism:   

Homo sapiens


Treatment:   

NT


Genotype:   

WT


Harvested Time:   

day7


Layout:   

SINGLE


Instrument model:   

NextSeq 550


Technique:   

SAR-seq


Others:   

control: GSM5100403-input_for_SAR-seq_in_iNeuron


Fastqc:  



Genome Browser

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  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)



Distribution

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Genomic distribution Repeat distribution Top 10 simple repeats


Quantification

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Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrM056003087232.886/
chr9_gl000199_random34371345623446544.6027/
chr1110270918110270958610270938134.8163/
chr118032299918032354718032327434.3081/
chr274159647416232741613233.432/
chr1918823785188241691882397230.9828/
chr313509677513509715713509699730.7605/
chr594532058945325509453223930.7496/
chr413104062213104099213104081930.1702/
chr616310608816310649416310625830.0275/
Download the Full Peak List


Visualization

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Motif Analysis

Manual





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