DNA Damage Atlas


GSM5100462-NT_for_MMS_SAR-seq_in_iNeuron_rep2




Basic Information

Manual

Sample ID:   

SRR13764991


Source Project ID:   

GSE167257

Cell Type:   

iNeuron


Organism:   

Homo sapiens


Treatment:   

NT


Genotype:   

WT


Harvested Time:   

day7


Layout:   

SINGLE


Instrument model:   

NextSeq 550


Technique:   

SAR-seq


Others:   

control: GSM5100403-input_for_SAR-seq_in_iNeuron


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr1090651111906515279065133226.6124/
chrUn_gl00021240788409824088425.3074/
chr491464970914654249146522524.3849/
chr462883864628843836288418823.1858/
chr1436544421365448373654460221.9841/
chr583546144835463978354625621.6887/
chr120918630920918672220918654819.5798/
chr1110266282110266357210266317419.4842/
chr2134905738349060783490591019.2535/
chr635175503518045351787019.2535/
Download the Full Peak List



Overlapped Peaks from Replicates




Average Peak Intensity Top 10 Merged Peaks
Chromosome Start End Summit Intensity Strand
chr491464996914653819146522528.7552/
chr1090651124906515279065133227.4708/
chr115803207015803243815803222325.6364/
chr462883896628843836288418824.7093/
chr381494465814947118149454524.6538/
chr1110266291510266352710266317423.7522/
chr319345489319345564519345512623.0427/
chr2134905782349060683490591022.8887/
chr1436544421365448253654460222.6371/
chr1361998592619991676199890222.4345/
Download the Full Merged Peak List



Motif Analysis

Manual





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