DNA Damage Atlas

GSM5100464-AsisIminusDOX_SAR-seq_in_preB

Basic Information Genome Browser Quantification Visualization


Basic Information

Manual

Sample ID:   

SRR13764993


Source Project ID:   

GSE167257

Cell Type:   

Abel pre-B cell


Organism:   

Mus musculus


Treatment:   

NT


Genotype:   

WT


Targeted break:   

AsiSI


Layout:   

SINGLE


Instrument model:   

NextSeq 550


Technique:   

SAR-seq


Fastqc:  



Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)



Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr3116808386116808389/276.745/
chr115161999651619999/249.07/
chr175625673756256740/249.07/
chr23223600532236008/249.07/
chr117260766072607663/193.721/
chr128683489386834896/193.721/
chr107857487278574875/166.047/
chr1131632992131632995/166.047/
chr1131827650131827653/166.047/
chr1151949452151949455/166.047/
Download the Full Peak List


Visualization

Manual





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