DNA Damage Atlas


GSM5100465-SAR-seq_in_rat_primary_neuron




Basic Information

Manual

Sample ID:   

SRR13764994


Source Project ID:   

GSE167257

Cell Type:   

Rat cortical neurons


Organism:   

Rattus norvegicus


Treatment:   

Aphidicolin


Treatment Dose:   

5uM


Genotype:   

WT


Harvested Time:   

day7 (post plating)


Layout:   

SINGLE


Instrument model:   

NextSeq 550


Technique:   

SAR-seq


Others:   

control: GSM5100466-input_for_SAR-seq_in_primary_neuron


Fastqc:  




Genome Browser

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  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

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Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
MT052442430130.639/
MT570993667324128.213/
MT9561102301011648.2152/
477447845774484947744820221.0985/
477449411774498837744965618.8418/
1468065735680668706806621317.7854/
986160332861614968616081616.6753/
1346224821462258104622522416.3431/
1711130258111310621113058716.1531/
1911910708119113051191101915.0149/
Download the Full Peak List



Motif Analysis

Manual





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