DNA Damage Atlas


GSM5191848-HDF_CPD




Basic Information

Manual

Sample ID:   

SRR14022098,SRR14022099


Source Project ID:   

GSE159807

Cell Type:   

HDF


Organism:   

Homo sapiens


Treatment:   

UVB


Treatment Dose:   

1000 J/m2


Harvested Time:   

repair time: 0 hr


Layout:   

PAIRED


Instrument model:   

Illumina HiSeq 2500


Technique:   

Circle-damage-seq


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
rDNA1246315721141612.34539/
chr19_gl000208_random88842571.86919/
chrUn_gl0002242869468133571.65444/
rDNA1449238817961.64835/
chrUn_gl0002201290111302151293971.63062/
rDNA3155432672319641.39173/
rDNA3750738130379031.34683/
rDNA2711329031051.33662/
chrUn_gl0002206891575430708131.31292/
chr9_gl000198_random2023396181.26463/
Download the Full Peak List



Motif Analysis

Manual





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