DNA Damage Atlas


GSM5217300-dDSB_Spo11-myc18_Rec104-FRB-HA3_t4_5_+_Rapamycin_t4_ChIP




Basic Information

Manual

Sample ID:   

SRR14093041


Source Project ID:   

GSE171042

Organism:   

Saccharomyces cerevisiae


Strain:   

SK1 + ZP591


Treatment:   

Rapamycin


Treatment Dose:   

1ug/mL


Genotype:   

Rec104-FRB-HA3 depletion


Layout:   

PAIRED


Instrument model:   

Illumina HiSeq 2500


Technique:   

Protec-seq


Others:   

antibody: anti-myc antibody; index 1: CGCTCATT; index 2: TAATCTTA


Fastqc:  




Genome Browser

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  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

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Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrVII398688400363/5684.06/
chrVII833196834510/5554/
chrX622303623604/4242.02/
chrXV198657199909/3158.73/
chrXV475318476983/3153.8/
chrXIII358867361036/3100.95/
chrXIV429739431251/2990.13/
chrX401476403358/2831.32/
chrXVI463116464347/2689.19/
chrIV690156691864/2540.08/
Download the Full Peak List



Motif Analysis

Manual





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