Sample Detail

Basic Information

Manual

Sample ID:

SRR14507389

Source Project ID:

GSE174296

Cell Type:

Splenic mature B cells

Organism:

Mus musculus

Treatment:

cytokine stimulation;anti-CD40+IL4

Treatment Time:

96 hrs

Genotype:

A150

Targeted break:

Sg3

Layout:

PAIRED

Instrument model:

NextSeq 550

Technique:

CSR-HTGTS

Fastqc:

Genome Browser

Manual

link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)

Distribution

Manual

Genomic distribution	Repeat distribution	Top 10 simple repeats

Quantification

Manual

Peak Intensity

Top 10 Peaks

Chromosome	Start	End	Summit	Intensity	Strand
chr12	113362384	113368402	113367979	12571.2	-
chr12	113271254	113279166	113276780	7566.04	-
chr5	136982611	136982826	136982825	3984.31	-
chr7	130591572	130591782	130591573	3059.38	+
chr4	102619949	102620154	102620150	2969.06	-
chr14	74845989	74846198	74846194	2966.16	-
chr4	108678979	108679190	108679186	2564.11	-
chr14	45812658	45812872	45812858	2317.49	-
chr7	90441810	90442025	90442020	2306.71	-
chr10	121763064	121763289	121763278	1953.71	-

Download the Full Peak List

Overlapped Peaks from Replicates

Average Peak Intensity

Top 10 Merged Peaks

Chromosome	Start	End	Summit	Intensity	Strand
chr12	113363293	113368396	113367979	16288.3	-
chr12	113272027	113278963	113276780	8853.4	-
chr5	136982621	136982826	136982825	4356.65	-
chr7	130591572	130591780	130591573	3172.7	+
chr14	74845989	74846198	74846194	2988.2	-
chr4	102619950	102620154	102620150	2817.38	-
chr7	90441810	90442025	90442020	2659.57	-
chr14	45812658	45812870	45812858	2318.78	-
chr4	108678979	108679189	108679186	2223.68	-
chr10	121763066	121763287	121763278	2081.97	-

Download the Full Merged Peak List

Visualization

Manual

Profile

Heatmap

Download the matrix file

Motif Analysis

Manual

Download