DNA Damage Atlas


GSM5315991-CtIPA_PKKO_PpoI_G1




Basic Information

Manual

Sample ID:   

SRR14554377


Source Project ID:   

GSE174496

Cell Type:   

v-Abl transformed B-cell


Organism:   

Mus musculus


Strain:   

129


Treatment:   

STI571 + RO3306


Treatment Dose:   

3 µM STI571 + 10 uM RO3306


Genotype:   

CtIP A/A DNA-PKcs -/-


Cell Phase:   

G1


Layout:   

PAIRED


Instrument model:   

Illumina MiSeq


Technique:   

HTGTS


Others:   

sample type: PpoI


Fastqc:  




Genome Browser

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  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

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Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr145669157356697005566941569759.43+
chr176941203694245269419429414.69+
chr177951877795337679523638465.55-
chr71207509351207573251207541697314.83+
chr128043868180445560804415377065.51+
chr51187580101187621971187597556798.77+
chr172466298224669740246660216662.76+
chr87205290272054258720534446539.97-
chr56415642264159664641577396422.93+
chr59646559096468321964676045453.92+
Download the Full Peak List



Motif Analysis

Manual





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