DNA Damage Atlas


GSM5315992-CtIPA_PKKO_CJ_G1




Basic Information

Manual

Sample ID:   

SRR14554378


Source Project ID:   

GSE174496

Cell Type:   

v-Abl transformed B-cell


Organism:   

Mus musculus


Strain:   

129


Treatment:   

STI571 + RO3306


Treatment Dose:   

3 µM STI571 + 10 uM RO3306


Genotype:   

CtIP A/A DNA-PKcs -/-


Cell Phase:   

G1


Layout:   

PAIRED


Instrument model:   

Illumina MiSeq


Technique:   

HTGTS


Others:   

sample type: CJ


Fastqc:  




Genome Browser

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  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

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Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr9113261445113261661113261451121538+
chr173853385738536447385362372321.9-
chr580500857805010938050086028260.6+
chr1693597925935981389359793022651.4+
chr119986349199865731998635521539.1+
chr713190176413190198413190176519350.6+
chr1793046265930465049304650318999.7-
chr1878198239781985887819834018703.7+
chr995425901954261849542590118552.9+
chr734958167349583773495816818244.8+
Download the Full Peak List



Motif Analysis

Manual





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