DNA Damage Atlas


GSM5315996-PKKO_PpoI_G1




Basic Information

Manual

Sample ID:   

SRR14554382


Source Project ID:   

GSE174496

Cell Type:   

v-Abl transformed B-cell


Organism:   

Mus musculus


Strain:   

129


Treatment:   

STI571 + RO3306


Treatment Dose:   

3 µM STI571 + 10 uM RO3306


Genotype:   

DNA-PKcs -/-


Cell Phase:   

G1


Layout:   

PAIRED


Instrument model:   

Illumina MiSeq


Technique:   

HTGTS


Others:   

sample type: PpoI


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr511484878911485598211485209838343+
chr1280440254804423128044153722434.7+
chr511875934311876016311875975920535+
chr712075222612075498012075416118046.9-
chr1456693431566961765669414717660.9-
chr596467141964679189646759816603.1+
chr1779518607952918795236013476.9-
chr1724663555246672422466601612817.2-
chrX14290386514290539614290468412240.2-
chr146075798460763424607608810983.5-
Download the Full Peak List



Motif Analysis

Manual





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