DNA Damage Atlas


GSM5315997-PKKO_CJ_G1




Basic Information

Manual

Sample ID:   

SRR14554383


Source Project ID:   

GSE174496

Cell Type:   

v-Abl transformed B-cell


Organism:   

Mus musculus


Strain:   

129


Treatment:   

STI571 + RO3306


Treatment Dose:   

3 µM STI571 + 10 uM RO3306


Genotype:   

DNA-PKcs -/-


Cell Phase:   

G1


Layout:   

PAIRED


Instrument model:   

Illumina MiSeq


Technique:   

HTGTS


Others:   

sample type: CJ


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

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Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr9113261449113261685113261451101971+
chrP4333978282977366.5+
chr173853385738536337385362352929.4-
chr713190176413190198213190176537405.2+
chr119986352199865731998635532397.8+
chr415315285815315322115315305831230.1-
chrY90812766908132479081324729357.4-
chr1693597930935981399359793026645+
chr871432933714331817143317122454.9-
chr314905232314905293914905272822277.8-
Download the Full Peak List



Motif Analysis

Manual





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