DNA Damage Atlas


GSM5508984-PreB-Lig4-18hrs-AsisI-RPA-SSDS-control-for-HU




Basic Information

Manual

Sample ID:   

SRR15369972


Source Project ID:   

GSE181668

Cell Type:   

Abel pre-B cell


Organism:   

Mus musculus


Treatment:   

NT


Genotype:   

Lig4-/-


Harvested Time:   

18hrs


Cell Phase:   

G0/G1


Targeted break:   

AsiSI


Layout:   

PAIRED


Instrument model:   

NextSeq 550


Technique:   

ChIP-seq (anti-RPA)


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr48488434484884347/1148/
chr141827049218270495/689/
chr175884080258840805/574/
chr185847059058470593/459/
chr33741983437419837/459/
chr68391426783914270/459/
chr10108332617108332620/344/
chr1142341239142341242/344/
chr14118717406118717409/344/
chr145425956454259567/344/
Download the Full Peak List




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