DNA Damage Atlas


GSM5508993-PreB-WT-18hrs-AsisI-ENDseq




Basic Information

Manual

Sample ID:   

SRR15370002


Source Project ID:   

GSE181669

Cell Type:   

Abel pre-B cell


Organism:   

Mus musculus


Treatment:   

NT


Genotype:   

WT


In-situ Treatment:   

Exo VII + Exo T


Harvested Time:   

18hrs


Cell Phase:   

G1


Targeted break:   

AsisI (18hrs)


Spike-in Intensity:   

no spike in


Layout:   

SINGLE


Instrument model:   

Illumina NexSeq550


Technique:   

END-seq


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Telomere Analysis

Manual

Ratio of (G-rich strand/C-rich strand): 0.007363



Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr9121477512121477515/74614/
chr159939343499393437/66440/
chr57329285273292855/56836/
chr115335176253351765/48040/
chr4139192791139192794/47667/
chr2156144262156144265/47325/
chr183577209135772094/46310/
chr1143739618143739621/45699/
chr74424679644246799/44186/
chr126936148269361485/43803/
Download the Full Peak List




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