DNA Damage Atlas


GSM5631751-Abl-Lig4-STI-AsisI-NT-8h-RPA-ChIPseq




Basic Information

Manual

Sample ID:   

SRR16477880


Source Project ID:   

GSE186086

Cell Type:   

Abel pre-B cell


Organism:   

Mus musculus


Treatment:   

NT


Genotype:   

Lig4-/-


Harvested Time:   

8hrs


Cell Phase:   

G0/G1


Targeted break:   

AsiSI


Layout:   

SINGLE


Instrument model:   

NextSeq 550


Technique:   

ChIP-seq (anti-RPA)


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr48488476684884769/951/
chr8117256843117256846/793/
chr194974058249740585/317/
chr4155831545155831548/317/
chr842589204258923/317/
chr137570811275708115/264/
chr38918799989188002/211/
chrX106011725106011728/211/
chr10111122201111122204/159/
chr107857487278574875/159/
Download the Full Peak List




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