DNA Damage Atlas


GSM5661642-Drosophila_Adult-yw-male-2hr-CPD_rep2




Basic Information

Manual

Sample ID:   

SRR16634672


Source Project ID:   

GSE184926

Cell Type:   

Drosophila Adults-male


Organism:   

Drosophila melanogaster


Strain:   

yw


Treatment:   

UVB


Treatment Dose:   

1200J/m2


Harvested Time:   

repair time: 2hr


Layout:   

SINGLE


Instrument model:   

Illumina HiSeq 2500


Technique:   

XR-seq


Others:   

damage ip antibody: anti-CPD


Fastqc:  




Genome Browser

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  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

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Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrY97370697620697490039.4743/
chr2L59444865949451594865625.1976/
chr2L11525590115293991152789623.1643/
chr3L81005478101881810127422.0266/
chr3R21265710212672332126635821.8872/
chr2R51443665145609514492821.8514/
chr3R27547629275491002754860321.2062/
chrY30189993019990301952120.8466/
chr3R15138577151406131513928620.6576/
chr2L51146955116918511633020.4008/
Download the Full Peak List



Motif Analysis

Manual





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