DNA Damage Atlas


GSM5736239-Unblocked_control




Basic Information

Manual

Sample ID:   

SRR17260889


Source Project ID:   

GSE190955

Cell Type:   

K562


Organism:   

Homo sapiens


Spike-in Intensity:   

Leptotrichia wadei


Layout:   

PAIRED


Instrument model:   

Illumina NovaSeq 6000


Technique:   

SSiNGLe-AP


Others:   

An aliquot (1%) of the eluted genomic DNA with spike-ins was used to generate a sequencing library directly to serve as the unblocked control.


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

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Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr12664511706645166466451291339.174/
chr5715952317159544771595338194.92/
chr7150093223150093430150093325157.735/
chr2103955010397601039654145.252/
chr7151062218151062458151062337134.256/
chr20421366474213684942136747114.849/
chr22196772901967762819677458111.854/
chr10609291616092936460929261101.585/
chr9133732595133733147133732978101.179/
chr11688999836890025268900116100.617/
Download the Full Peak List



Motif Analysis

Manual





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