DNA Damage Atlas


GSM6124566-XF_975_AltN171




Basic Information

Manual

Sample ID:   

SRR19146741


Source Project ID:   

GSE202567

Cell Type:   

Spleen B cell


Organism:   

Mus musculus


Strain:   

C57BL/6


Treatment:   

cytokine stimulation;ABLki


Treatment Time:   

72hrs


Treatment Dose:   

3uM


Genotype:   

Shld1-/-


Targeted break:   

target locus: Ia deletion in non-coding IgH Sm-Sa deletion cells


Layout:   

PAIRED


Instrument model:   

NextSeq 550


Technique:   

CSR-HTGTS


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr51369826211369828251369828215322.43-
chr13343918833439389334391882700.94+
chr21031381961031383971031381962700.94+
chr21658661616586817165866162700.94+
chr38752555587525756875255552700.94+
chr78018831080188511801885102700.94-
chr106044566160445863604458612687.57-
chr151006726701006728721006726702687.57+
chr15822795158228153582279512687.57+
chr21329018441329020461329020442687.57-
Download the Full Peak List



Motif Analysis

Manual





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