DNA Damage Atlas


GSM6124577-XF_986_AltN172




Basic Information

Manual

Sample ID:   

SRR19146730


Source Project ID:   

GSE202567

Cell Type:   

Spleen B cell


Organism:   

Mus musculus


Strain:   

129s


Treatment:   

cytokine stimulation;ABLki


Treatment Time:   

72hrs


Treatment Dose:   

3uM


Genotype:   

53BP1-/-


Targeted break:   

target locus: Single CBE insertion with the same orientation as 3'CBEs in non-coding IgH Sm-Sa deletion cells


Layout:   

PAIRED


Instrument model:   

NextSeq 550


Technique:   

CSR-HTGTS


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr41507699151507701161507701152398.81-
chr69081924190819442908192412398.81+
chrX9090089790901098909008972398.81+
chr176750460567504807675046052386.93+
chr81188470571188472611188472572363.53-
chr73508190435082115350819042285.12+
Download the Full Peak List



Motif Analysis

Manual





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