DNA Damage Atlas


GSM6215140-BLISS_HU_Dox_rep1




Basic Information

Manual

Sample ID:   

SRR19570667


Source Project ID:   

GSE205583

Cell Type:   

U2OS MYC-tet-on


Organism:   

Homo sapiens


Treatment:   

Hydroxyurea + Doxycycline


Treatment Time:   

4hrs + 24hrs


Treatment Dose:   

3.5mM Hydroxyurea + 1ug/mL Doxycycline


Genotype:   

Dox inducible overexpression of MYC


Layout:   

PAIRED


Instrument model:   

Illumina NextSeq 2000


Technique:   

BLISS


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Telomere Analysis

Manual

Ratio of (G-rich strand/C-rich strand): 0



Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr34345645843456670434564581622.98+
chrM211440582335933.231-
chr4423278254232803042327825915.492+
chrM561176894893.695-
chrUn_gl000216805208074780724826.766-
chr10630626963064726306471770.427-
chr2210073546210073754210073746751.907-
chr12795513537955155479551354622.474+
chr14454975534549775545497555619.393+
chr18610761116107631361076112619.393+
Download the Full Peak List



Motif Analysis

Manual





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