Sample Detail

Basic Information

Manual

Sample ID:

SRR19570662

Source Project ID:

GSE205583

Cell Type:

U2OS MYC-tet-on

Organism:

Homo sapiens

Treatment:

Hydroxyurea + BI8626 + Doxycycline

Treatment Time:

4hrs + 4hrs + 24hrs

Treatment Dose:

3.5mM Hydroxyurea + 10uM BI8626 + 1ug/mL Doxycycline

Genotype:

Dox inducible overexpression of MYC

Layout:

PAIRED

Instrument model:

Illumina NextSeq 2000

Technique:

BLISS

Fastqc:

Genome Browser

Manual

link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)

Telomere Analysis

Manual


Ratio of (G-rich strand/C-rich strand): 0

Distribution

Manual

Genomic distribution	Repeat distribution	Top 10 simple repeats

Quantification

Manual

Peak Intensity

Top 10 Peaks

Chromosome	Start	End	Summit	Intensity	Strand
chrM	66	4182	791	634.805	-
chr4	99054095	99054304	99054095	598.168	+
chr2	157116446	157116709	157116457	570.421	+
chr10	49617957	49618158	49617957	435.383	+
chr10	57243572	57243777	57243576	426.888	+
chr18	40077625	40077830	40077628	426.888	+
chr8	121114500	121114708	121114500	420.731	+
chrX	114433710	114433913	114433912	369.509	-
chr15	62910162	62910367	62910162	365.904	+
chr4	55694838	55695038	55694838	312.543	+

Download the Full Peak List

Overlapped Peaks from Replicates

Average Peak Intensity

Top 10 Merged Peaks

Chromosome	Start	End	Summit	Intensity	Strand
chrM	66	4135	791	664.44	-
chr2	157116457	157116709	157116457	465.745	+
chr6	52860549	52860749	52860749	420.104	-
chr10	120801861	120802080	120801992	225.138	-
chr9_gl000199_random	110381	110581	110581	197.923	-

Visualization

Manual

Profile

Heatmap

Download the matrix file

Motif Analysis

Manual

Download