DNA Damage Atlas


GSM6260946-3rd_Effector_Female_1




Basic Information

Manual

Sample ID:   

SRR19784924


Source Project ID:   

GSE202887

Cell Type:   

Gut


Organism:   

Mus musculus


Strain:   

C57BL/6


Treatment:   

NT


Genotype:   

Rag1-/- NM


Targeted break:   

pST-sgRNA


Layout:   

PAIRED


Instrument model:   

Illumina HiSeq 2000


Technique:   

PEM-seq


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr15442866024428680344286803703653-
chr11759648297596504975965049316914-
chr529881190298813932988119068690.8+
chr240621428406217854062163039059.4-
chr1398412146984123619841214637061.1+
chr1269159314691595486915931417025.9+
Download the Full Peak List



Motif Analysis

Manual





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