DNA Damage Atlas


GSM6293324-P-A-1_human_genome




Basic Information

Manual

Sample ID:   

SRR19987609


Source Project ID:   

GSE190955

Cell Type:   

K562


Organism:   

Homo sapiens


Spike-in Intensity:   

Leptotrichia wadei


Layout:   

PAIRED


Instrument model:   

Illumina NovaSeq 6000


Technique:   

SSiNGLe-AP


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr1266451168664516936645129224661/
chr61605215531605217841605216671013.39/
chr12921774339217785192177532987.425/
chr2330916903309197933091833454.744/
chr14972045009720520997205108275.145/
chr7834883688348856883488467225.88/
chr17173036751730409217303864206.822/
chr15779106657791088377910773178.971/
chr5554700445547046155470143152.655/
chr6_mann_hap4121866512188831218773150.712/
Download the Full Peak List



Overlapped Peaks from Replicates




Average Peak Intensity Top 10 Merged Peaks
Chromosome Start End Summit Intensity Strand
chr1266451168664516746645129276742.8
chr61605215541605217841605216673670.69
chr23309169033091979330918332074.38
chr6_mann_hap4121866512188831218773883.028
chr7107410390107410694107410497795.991
chr15779106657791088377910773534.682
chr17173036751730387517303864128.77
chr10767207947672099476720893128.734
chr555470044554702445547014396.2961
chrUn_gl00021614495414574814555286.201
Download the Full Merged Peak List



Motif Analysis

Manual





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