DNA Damage Atlas


GSM6310752-MCF-7_2B




Basic Information

Manual

Sample ID:   

SRR20046537


Source Project ID:   

GSE207714

Cell Type:   

MCF-7


Organism:   

Homo sapiens


Treatment:   

NT


Layout:   

PAIRED


Instrument model:   

Illumina HiSeq 2500


Technique:   

Break-seq


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr9_gl000199_random33590350223444245.0011/
chr9_gl000199_random82381837228309337.1031/
chr9_gl000199_random87811884708802832.5957/
chr9_gl000199_random48269579764981829.1211/
chrUn_gl00021675386761757584728.1818/
chr9_gl000199_random11247912605011874127.6464/
chr9_gl000199_random13310513827113443627.5787/
chr9_gl000199_random43862458664425627.3279/
chr9_gl000199_random10071211206610723026.8915/
chr9_gl000199_random83844873008437225.5766/
Download the Full Peak List



Overlapped Peaks from Replicates




Average Peak Intensity Top 10 Merged Peaks
Chromosome Start End Summit Intensity Strand
chr9_gl000199_random33737349853444251.416/
chr9_gl000199_random82519837228309341.1882/
chr9_gl000199_random986781003219895435.0867/
chr9_gl000199_random83844856628437232.049/
chr9_gl000199_random10256511097210723030.6446/
chr9_gl000199_random43862457114425629.1362/
chrUn_gl00021240483412964088929.0381/
chr9_gl000199_random13868614187014068328.9039/
chr111697949411697977211697964326.4143/
chr9_gl000199_random13310513607313443625.8742/
Download the Full Merged Peak List



Motif Analysis

Manual





Copyright © 2023 All Rights Reserved by Wu lab