DNA Damage Atlas


GSM6372153-P1_END_seq_KM12




Basic Information

Manual

Sample ID:   

SRR20355147


Source Project ID:   

GSE203632

Cell Type:   

KM12


Organism:   

Homo sapiens


Treatment:   

NT


Genotype:   

WT


In-situ Treatment:   

Exo VII + Exo T + P1


Spike-in Intensity:   

56.8207


Spike-in percentage:   

20%


Layout:   

SINGLE


Instrument model:   

Illumina NexSeq550


Technique:   

END-seq


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Telomere Analysis

Manual

Ratio of (G-rich strand/C-rich strand): 0.033247



Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr15884559358845641188456157255.471-
chr20409049004090575140905137175.257-
chr4340785473407899034078774135.053+
chr10931151229311598993115552121.035+
chr10194539341945444219454194118.708+
chr14804921558049279580492447110.992-
chr3958826089588319295882828109.601-
chr1052793916527946745279440895.3419-
chr445440533454413874544112592.742+
chr1150217803502189045021832892.2921-
Download the Full Peak List



Motif Analysis

Manual





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