DNA Damage Atlas


GSM6428026-iNeuron_ddC_SAR-seq




Basic Information

Manual

Sample ID:   

SRR20749594


Source Project ID:   

GSE210312

Cell Type:   

iNeuron


Organism:   

Homo sapiens


Treatment:   

ddC


Treatment Time:   

18 hours prior to cell harvesting


Treatment Dose:   

40uM


Genotype:   

WT


Harvested Time:   

day7


Layout:   

SINGLE


Instrument model:   

NextSeq 550


Technique:   

SAR-seq


Others:   

control: GSM5100403-input_for_SAR-seq_in_iNeuron


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrM0559413061.6551/
chr310555583410555636710555603142.887/
chr1213311146213311216713311196641.0065/
chr1229046829119629080040.8024/
chr512346251312346405012346342440.7597/
chr121669109921669211421669148040.4654/
chr1130774916307755743077531040.313/
chr318410993184118371841144940.2637/
chr1875622850756248447562426240.1845/
chr2055746055852555770039.4265/
Download the Full Peak List



Motif Analysis

Manual





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