DNA Damage Atlas


GSM6573550-PEM-seq_HEK293T_CasMINI_HBB




Basic Information

Manual

Sample ID:   

SRR21530201


Source Project ID:   

GSE213149

Cell Type:   

293T


Organism:   

Homo sapiens


Treatment:   

transfected with gRNA-CasMINI plasmid


Genotype:   

WT


Harvested Time:   

3days


Targeted break:   

HBB locus


Layout:   

PAIRED


Instrument model:   

Illumina HiSeq 2500


Technique:   

PEM-seq


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr1568132225681328036813263251773.7-
chr1211174069111174091111174069115113.7+
chr1544676947446771794467694714332+
chr1081177698117971811796912345.4-
chr1111943788611943808811943808812345.4-
chr1212057535612057555812057555812345.4-
chr1914980970149811721498117212345.4-
chr1532173401321736043217360412284.6-
chr544497563444977664449776312284.6-
chr938572626385728293857282912284.6-
Download the Full Peak List



Motif Analysis

Manual





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