DNA Damage Atlas


GSM6573564-PEM-seq_HEK293T_Un1Cas12f1_INFg




Basic Information

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Sample ID:   

SRR21530182


Source Project ID:   

GSE213149

Cell Type:   

293T


Organism:   

Homo sapiens


Treatment:   

transfected with gRNA-Un1Cas12f1 plasmid


Genotype:   

WT


Harvested Time:   

3days


Targeted break:   

INFg locus


Layout:   

PAIRED


Instrument model:   

Illumina HiSeq 2500


Technique:   

PEM-seq


Fastqc:  




Genome Browser

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  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

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Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr1568132229681327906813254119235.9+
chr313110608713110628913110608917807.5+
chr359267270592674725926727217807.5+
chr1210059236010059256610059256017461.8-
chr753888305389038538883017293.9+
chr468233009682332116823300913355.7+
chr811890271211890291511890271213289.9+
chr1748586416485866204858641613224.7+
chr2060808503608087076080850713224.7+
chr412774497912774518312774517913224.7-
Download the Full Peak List



Motif Analysis

Manual





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